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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929388.1_cds_XP_016476688.1_68491
CDS Infomation

[gene=LOC107798230] [db_xref=GeneID:107798230] [protein=15-cis-zeta-carotene isomerase, chloroplastic] [protein_id=XP_016476688.1] [location=join(1192..1605,3375..3521,3648..3857,4590..4925)] [gbkey=CDS]
Sequence

ATGGCCACTTCAATTTTCCTCTCACATCCTCTTTTTCCTTTCCCTCCTTTATCATCAAAA
CACCATAAAATCCCAACTCCCAAACAAACCTCAGCCATATTAGCATATCACCCCACCATC
AAATACATCAAGAAACCATTTTTCAACTCCCATTTTCCATTTCCTTACAAACCCAGAAAG
GAAATTTGGTCTATTTCAGTGGGAAGAACACAAATTGATGATAAAGATGAAATCTTGGTG
GGGGAAGATTCAGCTGAATTCCAGTTATCCAAACAAAAGATTTCATCTTGGGTTTATTTT
ACTGGGATTCTTGGTGTTGTTCTTTATGTTCTTAATGTTATTTGGATTGATAATTCAACT
GGCTTTGGAAAATCATTCATTGATGCTGTTTCCACCATTTCAGATAGCCATGAGATTGTA
ATGCTTTCCCTCACCTTGATTTTCGCAATAGTCCACAGCGGTCTTGCTAGTCTTAGAGAC
AAAGGTGAGGAACTCATTGGAGAACGTGCCTTTCGTGTAGTGTTTGCCGGGATATCTTTG
CCATTGGCAGTCAGCACAATTGTGTATTTCATTAACCACCGATACGATGGAGTGCAATTA
TGGCAATTACAGAGCATAGCCGGACTTCATGAACTAGTTTGGTTCTCTAACTTTATTTCC
TTCTTCTTCCTATACCCATCGACATTCAATTTACTAGAGGTAGCAGCTGTTGACAAACCC
AAGATACATCTTTGGGAAACTGGGATTATGAGGATTACCAGGCATCCACAGATGGTTGGG
CAGGTGATATGGTGCTTAGCTCACACGTTGTGGATCGGGAACTCAGTTGCAGTGGCTGCC
TCAGTAGGTTTGATTGGACATCATCTGTTTGGTGCCTGGAATGGAGACCGAAGGTTAGCC
ATACGACATGGTGAGGCTTTTGAAGTCGTGAAGAACAGAACGAGTGTCATACCATTTGCA
GCTATTCTTGATGGCCGCCAAAAGTTGCCTGAAGATTATTACAAGGAATTTTTCAGGTTG
CCTTATGTATCAATAACAGCATTGACATTAGGTGCTTACTTTCTCCATCCCATTATGCAA
GCTGCCAGTTATCGGCTGCACTGGTAG

Peptide Sequence

PEP ID

XP_016476688.1
PEP Infomation

PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nicotiana tabacum]
Sequence

MATSIFLSHPLFPFPPLSSKHHKIPTPKQTSAILAYHPTIKYIKKPFFNSHFPFPYKPRK
EIWSISVGRTQIDDKDEILVGEDSAEFQLSKQKISSWVYFTGILGVVLYVLNVIWIDNST
GFGKSFIDAVSTISDSHEIVMLSLTLIFAIVHSGLASLRDKGEELIGERAFRVVFAGISL
PLAVSTIVYFINHRYDGVQLWQLQSIAGLHELVWFSNFISFFFLYPSTFNLLEVAAVDKP
KIHLWETGIMRITRHPQMVGQVIWCLAHTLWIGNSVAVAASVGLIGHHLFGAWNGDRRLA
IRHGEAFEVVKNRTSVIPFAAILDGRQKLPEDYYKEFFRLPYVSITALTLGAYFLHPIMQ
AASYRLHW

Transcript Sequence

Gene sequence data has not been registered.